Extending ebnm with custom ebnm-style functionsUpdated 6 months ago

Peter Carbonetto

Rendered from extending_ebnm.Rmd in ebnm 1.1-34.
An analysis of weighted on-base averages using the ebnm packageUpdated 8 months ago

Peter Carbonetto

Rendered from baseball.Rmd in ebnm 1.1-34.
Introduction to the empirical Bayes normal means model via shrinkage estimationUpdated 9 months ago

Peter Carbonetto

Rendered from shrink_intro.Rmd in ebnm 1.1-34.
Analysis of single-cell RNA-seq data using fastglmpcaUpdated 10 months ago

Eric Weine and Peter Carbonetto

Rendered from intro_fastglmpca.Rmd in fastglmpca 0.1-106.
Illustration of mixsqp applied to a small data set, and a large oneUpdated 11 months ago

Youngseok Kim, Peter Carbonetto and Matthew Stephens

Rendered from mixsqp-intro.Rmd in mixsqp 0.3-54.
Empirical Bayes matrix factorization for data driven priorUpdated 1 years ago

Gao Wang

Rendered from flash_mash.Rmd in mashr 0.2.81.
Introduction to mashrUpdated 2 years ago

Matthew Stephens

Rendered from intro_mash.Rmd in mashr 0.2.81.
Accounting for correlations among measurementsUpdated 2 years ago

Matthew Stephens

Rendered from intro_correlations.Rmd in mashr 0.2.81.
eQTL analysis outlineUpdated 2 years ago

Matthew Stephens

Rendered from eQTL_outline.Rmd in mashr 0.2.81.
Sample from mash posteriorsUpdated 3 years ago

Yuxin Zou

Rendered from mash_sampling.Rmd in mashr 0.2.81.
mashr with common baselineUpdated 4 years ago

Yuxin Zou

Rendered from intro_mashcommonbaseline.Rmd in mashr 0.2.81.
mashr with common baseline at meanUpdated 4 years ago

Yuxin Zou

Rendered from intro_mashbaselinemean.Rmd in mashr 0.2.81.
Introduction to mash: data-driven covariancesUpdated 6 years ago

Matthew Stephens

Rendered from intro_mash_dd.Rmd in mashr 0.2.81.
Simulation with non-canonical matricesUpdated 7 years ago

Matthew Stephens

Rendered from simulate_noncanon.Rmd in mashr 0.2.81.
An illustration of EbayesThresh with heterogeneous varianceUpdated 7 years ago

Peter Carbonetto

Rendered from ebayesthresh.Rmd in EbayesThresh 1.4-13.